Discoveries

An list of cool discoveries people have submitted for the Informatics Collaboration Cafe

You can find the form to add new discoveries here: https://forms.gle/PCpRe214Jjptm8Cz8

Fastremap

Renumber and relabel Numpy arrays at C++ speed and physically convert rectangular Numpy arrays between C and Fortran order using an in-place transposition.…

Ilastik

Ilastik allows to segment images based on live training. You draw on the image examples of the different elements you want to segment and it updates the model live.

MultiQC, Atria(maybe)

MultiQC is the standard in bioinformatics reporting.

here

A little package for managing file paths in R projects. Using here you can always get file paths that’re relative to the project root which’re expanded to the full system…

Mateus Harrington

janitor

Has super handy function for cleaning data, particularly cleaning column names

Mateus Harrington